Details for gene set BIOCARTA_FMLP_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	normalized_counts_per_kilobase_for_GSEA.class.cls #AHRR-overexpressed_versus_Control
Phenotype	class.cls#AHRR-overexpressed_versus_Control
Upregulated in class	AHRR-overexpressed
GeneSet	BIOCARTA_FMLP_PATHWAY
Enrichment Score (ES)	0.5510481
Normalized Enrichment Score (NES)	1.6214378
Nominal p-value	0.0
FDR q-value	0.24291402
FWER p-Value	0.736

Fig 1: Enrichment plot: BIOCARTA_FMLP_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	FPR1	na			18	3.109	0.2043	Yes
2	PLCB1	na			222	1.847	0.3149	Yes
3	NCF2	na			685	1.136	0.3640	Yes
4	CAMK1	na			693	1.133	0.4384	Yes
5	MAP2K1	na			1360	0.750	0.4505	Yes
6	MAP2K6	na			1483	0.702	0.4900	Yes
7	NFATC2	na			1645	0.649	0.5239	Yes
8	NCF1C	na			1861	0.590	0.5507	Yes
9	CALM1	na			2418	0.478	0.5510	Yes
10	NFATC4	na			3360	0.338	0.5205	No
11	MAPK1	na			4091	0.261	0.4967	No
12	RELA	na			4153	0.254	0.5101	No
13	NFKBIA	na			4599	0.219	0.4996	No
14	CALM2	na			4797	0.203	0.5019	No
15	RAC1	na			5545	0.151	0.4700	No
16	MAP2K2	na			5609	0.147	0.4762	No
17	MAP2K3	na			6098	0.116	0.4565	No
18	GNB1	na			6261	0.106	0.4544	No
19	MAPK3	na			6288	0.105	0.4598	No
20	NFATC3	na			6343	0.102	0.4635	No
21	PPP3CA	na			6350	0.101	0.4699	No
22	NFKB1	na			7195	0.054	0.4260	No
23	MAPK14	na			7326	0.048	0.4219	No
24	RAF1	na			8405	-0.007	0.3619	No
25	ELK1	na			9184	-0.045	0.3212	No
26	PPP3CB	na			9610	-0.064	0.3015	No
27	PAK1	na			11405	-0.159	0.2113	No
28	PPP3CC	na			11856	-0.184	0.1982	No
29	CALM3	na			12159	-0.201	0.1945	No
30	MAP3K1	na			12221	-0.205	0.2046	No
31	HRAS	na			12363	-0.213	0.2107	No
32	GNA15	na			13835	-0.320	0.1492	No
33	NFATC1	na			17423	-1.146	0.0235	No

Fig 2: BIOCARTA_FMLP_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_FMLP_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_FMLP_PATHWAY