Details for gene set BIOCARTA_G1_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	normalized_counts_per_kilobase_for_GSEA.class.cls #AHRR-overexpressed_versus_Control
Phenotype	class.cls#AHRR-overexpressed_versus_Control
Upregulated in class	Control
GeneSet	BIOCARTA_G1_PATHWAY
Enrichment Score (ES)	-0.50244874
Normalized Enrichment Score (NES)	-1.4082075
Nominal p-value	0.13777778
FDR q-value	1.0
FWER p-Value	0.991

Fig 1: Enrichment plot: BIOCARTA_G1_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TGFB1	na			2399	0.481	-0.0722	No
2	CCND1	na			3212	0.359	-0.0712	No
3	TGFB2	na			3660	0.306	-0.0566	No
4	CDKN1B	na			5709	0.140	-0.1534	No
5	GSK3B	na			5796	0.135	-0.1406	No
6	SMAD4	na			7554	0.037	-0.2345	No
7	TP53	na			7860	0.019	-0.2492	No
8	HDAC1	na			7874	0.019	-0.2475	No
9	RB1	na			8213	0.002	-0.2662	No
10	ATM	na			8283	-0.001	-0.2699	No
11	ABL1	na			8829	-0.027	-0.2969	No
12	TGFB3	na			9261	-0.048	-0.3149	No
13	ATR	na			10040	-0.086	-0.3474	No
14	CDKN1A	na			10829	-0.127	-0.3751	No
15	CDK4	na			13098	-0.259	-0.4688	Yes
16	CDC25A	na			13205	-0.268	-0.4399	Yes
17	CCNE1	na			13504	-0.293	-0.4186	Yes
18	TFDP1	na			14006	-0.335	-0.4033	Yes
19	CDK1	na			14598	-0.390	-0.3859	Yes
20	SKP2	na			15108	-0.445	-0.3567	Yes
21	CCNA1	na			15669	-0.523	-0.3203	Yes
22	SMAD3	na			16014	-0.581	-0.2641	Yes
23	CDK2	na			16222	-0.618	-0.1955	Yes
24	DHFR	na			16410	-0.663	-0.1200	Yes
25	CDK6	na			16528	-0.697	-0.0361	Yes
26	E2F1	na			16952	-0.845	0.0499	Yes

Fig 2: BIOCARTA_G1_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_G1_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_G1_PATHWAY