Details for gene set KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE[GSEA]

Table: GSEA Results Summary

Dataset	normalized_counts_per_kilobase_for_GSEA.class.cls #AHRR-overexpressed_versus_Control
Phenotype	class.cls#AHRR-overexpressed_versus_Control
Upregulated in class	AHRR-overexpressed
GeneSet	KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE
Enrichment Score (ES)	0.72859293
Normalized Enrichment Score (NES)	2.0570512
Nominal p-value	0.0
FDR q-value	0.03914303
FWER p-Value	0.022

Fig 1: Enrichment plot: KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NDST3	na			335	1.567	0.1324	Yes
2	EXTL1	na			429	1.406	0.2629	Yes
3	HS3ST3A1	na			610	1.209	0.3695	Yes
4	HS6ST3	na			903	0.983	0.4480	Yes
5	EXTL2	na			1254	0.792	0.5048	Yes
6	NDST1	na			1325	0.766	0.5748	Yes
7	EXT1	na			1564	0.673	0.6264	Yes
8	HS6ST1	na			1757	0.619	0.6754	Yes
9	EXTL3	na			1835	0.596	0.7286	Yes
10	XYLT1	na			3379	0.336	0.6745	No
11	HS3ST3B1	na			3854	0.285	0.6754	No
12	HS2ST1	na			4834	0.201	0.6398	No
13	EXT2	na			5403	0.161	0.6236	No
14	NDST2	na			7686	0.030	0.4984	No
15	B4GALT7	na			7756	0.025	0.4969	No
16	B3GAT3	na			8539	-0.014	0.4544	No
17	HS6ST2	na			10299	-0.099	0.3652	No
18	GLCE	na			10398	-0.105	0.3698	No
19	B3GALT6	na			10655	-0.117	0.3668	No
20	XYLT2	na			11866	-0.184	0.3167	No
21	HS3ST5	na			12011	-0.192	0.3271	No

Fig 2: KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE: Random ES distribution   
Gene set null distribution of ES for KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE