Details for gene set PID_UPA_UPAR_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	normalized_counts_per_kilobase_for_GSEA.class.cls #AHRR-overexpressed_versus_Control
Phenotype	class.cls#AHRR-overexpressed_versus_Control
Upregulated in class	AHRR-overexpressed
GeneSet	PID_UPA_UPAR_PATHWAY
Enrichment Score (ES)	0.6215418
Normalized Enrichment Score (NES)	1.6380011
Nominal p-value	0.0
FDR q-value	0.2702287
FWER p-Value	0.683

Fig 1: Enrichment plot: PID_UPA_UPAR_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	FPR1	na			18	3.109	0.1344	Yes
2	FPR3	na			63	2.566	0.2436	Yes
3	MMP9	na			100	2.304	0.3419	Yes
4	FPR2	na			120	2.184	0.4360	Yes
5	ITGAM	na			250	1.750	0.5049	Yes
6	BCAR1	na			943	0.952	0.5075	Yes
7	PLAU	na			1185	0.819	0.5296	Yes
8	LRP1	na			1399	0.735	0.5497	Yes
9	GPLD1	na			1433	0.721	0.5792	Yes
10	ITGB3	na			1500	0.696	0.6059	Yes
11	SERPINE1	na			1710	0.630	0.6215	Yes
12	TGFB1	na			2399	0.481	0.6039	No
13	PLAUR	na			3827	0.289	0.5363	No
14	ITGAV	na			4238	0.247	0.5241	No
15	CRK	na			4316	0.240	0.5302	No
16	ITGB2	na			4515	0.226	0.5289	No
17	RAC1	na			5545	0.151	0.4777	No
18	CTRC	na			5898	0.128	0.4636	No
19	FN1	na			7172	0.055	0.3945	No
20	NCL	na			7829	0.021	0.3586	No
21	PDGFD	na			8326	-0.003	0.3309	No
22	PDGFRB	na			9025	-0.037	0.2933	No
23	ITGB1	na			11695	-0.175	0.1511	No
24	ELANE	na			13697	-0.308	0.0521	No
25	ITGA5	na			14366	-0.367	0.0306	No
26	CTSG	na			15047	-0.438	0.0115	No
27	SRC	na			15836	-0.548	-0.0089	No
28	ITGB5	na			15837	-0.548	0.0150	No
29	ITGA3	na			16565	-0.706	0.0049	No
30	VLDLR	na			16630	-0.725	0.0329	No
31	HGF	na			16852	-0.804	0.0555	No

Fig 2: PID_UPA_UPAR_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: PID_UPA_UPAR_PATHWAY: Random ES distribution   
Gene set null distribution of ES for PID_UPA_UPAR_PATHWAY