Details for gene set REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM[GSEA]

Table: GSEA Results Summary

Dataset	normalized_counts_per_kilobase_for_GSEA.class.cls #AHRR-overexpressed_versus_Control
Phenotype	class.cls#AHRR-overexpressed_versus_Control
Upregulated in class	AHRR-overexpressed
GeneSet	REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM
Enrichment Score (ES)	0.5119131
Normalized Enrichment Score (NES)	1.6605849
Nominal p-value	0.0
FDR q-value	0.25353068
FWER p-Value	0.583

Fig 1: Enrichment plot: REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SGSH	na			121	2.179	0.0831	Yes
2	SDC2	na			184	1.950	0.1600	Yes
3	VCAN	na			239	1.778	0.2303	Yes
4	NDST3	na			335	1.567	0.2896	Yes
5	HS3ST3A1	na			610	1.209	0.3240	Yes
6	HS6ST3	na			903	0.983	0.3481	Yes
7	GLB1	na			926	0.970	0.3869	Yes
8	GPC5	na			1166	0.827	0.4076	Yes
9	NDST1	na			1325	0.766	0.4303	Yes
10	EXT1	na			1564	0.673	0.4447	Yes
11	GXYLT2	na			1648	0.648	0.4667	Yes
12	SDC3	na			1741	0.623	0.4872	Yes
13	HS6ST1	na			1757	0.619	0.5119	Yes
14	HS3ST3B1	na			3854	0.285	0.4059	No
15	HS2ST1	na			4834	0.201	0.3592	No
16	EXT2	na			5403	0.161	0.3340	No
17	IDUA	na			7211	0.054	0.2347	No
18	NAGLU	na			7406	0.044	0.2256	No
19	NDST2	na			7686	0.030	0.2111	No
20	B4GALT7	na			7756	0.025	0.2083	No
21	B3GAT3	na			8539	-0.014	0.1649	No
22	GXYLT1	na			8605	-0.018	0.1620	No
23	HS6ST2	na			10299	-0.099	0.0710	No
24	GLCE	na			10398	-0.105	0.0698	No
25	B3GALT6	na			10655	-0.117	0.0603	No
26	GUSB	na			11036	-0.137	0.0446	No
27	HS3ST5	na			12011	-0.192	-0.0022	No
28	SDC4	na			13077	-0.258	-0.0514	No
29	IDS	na			14080	-0.340	-0.0937	No
30	BCAN	na			14356	-0.366	-0.0940	No
31	HSPG2	na			14764	-0.408	-0.1000	No
32	GPC4	na			14801	-0.412	-0.0851	No
33	HPSE	na			15533	-0.502	-0.1055	No
34	GPC2	na			15964	-0.571	-0.1061	No
35	GPC6	na			16129	-0.600	-0.0905	No
36	GPC1	na			16163	-0.606	-0.0674	No
37	CSPG4	na			16985	-0.862	-0.0780	No
38	AGRN	na			17067	-0.904	-0.0453	No
39	SDC1	na			17165	-0.952	-0.0115	No
40	GPC3	na			17479	-1.197	0.0203	No

Fig 2: REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM: Random ES distribution   
Gene set null distribution of ES for REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM