Details for gene set BIOCARTA_ECM_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	normalized_counts_per_kilobase_for_GSEA_1.class_1.cls #AHRR-overexpressed_versus_Control
Phenotype	class_1.cls#AHRR-overexpressed_versus_Control
Upregulated in class	Control
GeneSet	BIOCARTA_ECM_PATHWAY
Enrichment Score (ES)	-0.35636118
Normalized Enrichment Score (NES)	-1.4324228
Nominal p-value	0.0
FDR q-value	1.0
FWER p-Value	1.0

Fig 1: Enrichment plot: BIOCARTA_ECM_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MYLK	na			1244	1.041	0.1076	No
2	ROCK1	na			3418	0.332	0.0422	No
3	PIK3CG	na			4134	0.252	0.0451	No
4	SHC1	na			4623	0.211	0.0536	No
5	TLN1	na			5107	0.178	0.0569	No
6	MAP2K1	na			5369	0.163	0.0700	No
7	HRAS	na			6149	0.115	0.0458	No
8	PXN	na			6592	0.090	0.0363	No
9	PIK3CA	na			7226	0.059	0.0109	No
10	PFN1	na			7993	0.024	-0.0280	No
11	MAPK1	na			8426	0.004	-0.0515	No
12	RHOA	na			8702	-0.007	-0.0657	No
13	MAPK3	na			8739	-0.009	-0.0662	No
14	PTK2	na			9119	-0.025	-0.0833	No
15	PIK3R1	na			10367	-0.083	-0.1392	No
16	RAF1	na			10433	-0.086	-0.1282	No
17	DIAPH1	na			10574	-0.093	-0.1202	No
18	FYN	na			12456	-0.194	-0.1927	No
19	ITGB1	na			13778	-0.286	-0.2181	No
20	GSN	na			16242	-0.699	-0.2373	Yes
21	SRC	na			16527	-0.788	-0.1189	Yes
22	ITGA1	na			17102	-1.130	0.0415	Yes

Fig 2: BIOCARTA_ECM_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_ECM_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_ECM_PATHWAY