Details for gene set BIOCARTA_PYK2_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	normalized_counts_per_kilobase_for_GSEA_1.class_1.cls #AHRR-overexpressed_versus_Control
Phenotype	class_1.cls#AHRR-overexpressed_versus_Control
Upregulated in class	Control
GeneSet	BIOCARTA_PYK2_PATHWAY
Enrichment Score (ES)	-0.23683338
Normalized Enrichment Score (NES)	-1.3985842
Nominal p-value	0.0
FDR q-value	1.0
FWER p-Value	1.0

Fig 1: Enrichment plot: BIOCARTA_PYK2_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	BCAR1	na			993	1.258	0.0988	No
2	JUN	na			1588	0.825	0.1668	No
3	MAP2K2	na			4215	0.245	0.0495	No
4	GRB2	na			4599	0.212	0.0541	No
5	PRKCA	na			4615	0.211	0.0792	No
6	SHC1	na			4623	0.211	0.1047	No
7	PLCG1	na			5148	0.176	0.0968	No
8	CALM1	na			5322	0.165	0.1074	No
9	MAP2K1	na			5369	0.163	0.1248	No
10	CALM2	na			5607	0.147	0.1296	No
11	HRAS	na			6149	0.115	0.1133	No
12	MAP2K4	na			6697	0.085	0.0931	No
13	RAC1	na			7273	0.058	0.0679	No
14	MAPK1	na			8426	0.004	0.0037	No
15	CALM3	na			8555	-0.001	-0.0034	No
16	MAPK3	na			8739	-0.009	-0.0125	No
17	RAF1	na			10433	-0.086	-0.0970	No
18	CRKL	na			10571	-0.093	-0.0933	No
19	MAP2K3	na			11064	-0.117	-0.1066	No
20	MAPK14	na			11305	-0.129	-0.1042	No
21	SOS1	na			11594	-0.144	-0.1028	No
22	PAK1	na			13194	-0.241	-0.1629	No
23	MAPK8	na			13225	-0.244	-0.1346	No
24	GNAQ	na			14664	-0.379	-0.1688	Yes
25	MAP3K1	na			15877	-0.593	-0.1640	Yes
26	PTK2B	na			16109	-0.651	-0.0970	Yes
27	SRC	na			16527	-0.788	-0.0236	Yes
28	PRKCB	na			16539	-0.792	0.0731	Yes

Fig 2: BIOCARTA_PYK2_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_PYK2_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_PYK2_PATHWAY