Details for gene set BIOCARTA_TNFR1_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	normalized_counts_per_kilobase_for_GSEA_2.class_2.cls #AHRR-overexpressed_versus_Control
Phenotype	class_2.cls#AHRR-overexpressed_versus_Control
Upregulated in class	AHRR-overexpressed
GeneSet	BIOCARTA_TNFR1_PATHWAY
Enrichment Score (ES)	0.40507814
Normalized Enrichment Score (NES)	1.6644422
Nominal p-value	0.0
FDR q-value	0.21784224
FWER p-Value	0.491

Fig 1: Enrichment plot: BIOCARTA_TNFR1_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	JUN	na			580	1.458	0.2097	Yes
2	ARHGDIB	na			2176	0.524	0.2072	Yes
3	BAG4	na			2807	0.393	0.2372	Yes
4	LMNA	na			3624	0.278	0.2376	Yes
5	MAP3K7	na			3858	0.255	0.2669	Yes
6	CASP8	na			3981	0.244	0.3006	Yes
7	RIPK1	na			4171	0.227	0.3277	Yes
8	MAP2K4	na			4491	0.202	0.3434	Yes
9	RB1	na			4656	0.189	0.3656	Yes
10	CRADD	na			4913	0.172	0.3798	Yes
11	MADD	na			5333	0.147	0.3807	Yes
12	TNF	na			5334	0.147	0.4051	Yes
13	DFFA	na			5882	0.119	0.3941	No
14	PAK2	na			6287	0.099	0.3879	No
15	SPTAN1	na			6616	0.085	0.3836	No
16	PRKDC	na			7220	0.059	0.3596	No
17	PARP1	na			7612	0.044	0.3449	No
18	FADD	na			8656	0.004	0.2870	No
19	TRADD	na			9032	-0.010	0.2677	No
20	TNFRSF1A	na			9206	-0.016	0.2607	No
21	DFFB	na			9470	-0.028	0.2505	No
22	PAK1	na			9653	-0.034	0.2460	No
23	CASP3	na			10208	-0.056	0.2243	No
24	CASP2	na			11678	-0.118	0.1615	No
25	LMNB1	na			12691	-0.171	0.1331	No
26	MAPK8	na			13301	-0.209	0.1337	No
27	LMNB2	na			13359	-0.213	0.1659	No
28	TRAF2	na			13880	-0.254	0.1789	No
29	MAP3K1	na			13983	-0.261	0.2166	No

Fig 2: BIOCARTA_TNFR1_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_TNFR1_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_TNFR1_PATHWAY