Details for gene set REACTOME_S_PHASE[GSEA]

Table: GSEA Results Summary

Dataset	normalized_counts_per_kilobase_for_GSEA_2.class_2.cls #AHRR-overexpressed_versus_Control
Phenotype	class_2.cls#AHRR-overexpressed_versus_Control
Upregulated in class	Control
GeneSet	REACTOME_S_PHASE
Enrichment Score (ES)	-0.2921359
Normalized Enrichment Score (NES)	-1.3964175
Nominal p-value	0.1632653
FDR q-value	1.0
FWER p-Value	1.0

Fig 1: Enrichment plot: REACTOME_S_PHASE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CCND1	na			1509	0.732	-0.0395	No
2	CDC25B	na			1846	0.618	-0.0200	No
3	PSMC4	na			3303	0.317	-0.0824	No
4	CDKN1A	na			3668	0.274	-0.0859	No
5	CCNH	na			3991	0.243	-0.0890	No
6	PSMD3	na			4285	0.218	-0.0919	No
7	PSMD5	na			4354	0.213	-0.0825	No
8	RB1	na			4656	0.189	-0.0877	No
9	PSMA6	na			5023	0.164	-0.0981	No
10	CDK7	na			5509	0.138	-0.1169	No
11	PSMD11	na			5771	0.125	-0.1239	No
12	PSMF1	na			5807	0.123	-0.1182	No
13	PSME4	na			6203	0.103	-0.1341	No
14	PSMA1	na			6253	0.101	-0.1306	No
15	PSMD2	na			6562	0.087	-0.1425	No
16	PSMB5	na			6774	0.078	-0.1496	No
17	PSMA4	na			6778	0.078	-0.1449	No
18	RFC2	na			6913	0.071	-0.1480	No
19	PSMC2	na			7024	0.067	-0.1501	No
20	PSMD14	na			7127	0.063	-0.1519	No
21	MCM8	na			7144	0.062	-0.1489	No
22	ORC2	na			7216	0.059	-0.1492	No
23	PSMC1	na			7256	0.058	-0.1478	No
24	PSMD6	na			7286	0.057	-0.1459	No
25	PSMD1	na			7413	0.052	-0.1498	No
26	RFC3	na			7865	0.034	-0.1731	No
27	PSMD13	na			7900	0.033	-0.1730	No
28	PSMD10	na			7967	0.031	-0.1748	No
29	CDC25A	na			8116	0.025	-0.1816	No
30	SKP1	na			8319	0.017	-0.1919	No
31	PSMA5	na			8336	0.017	-0.1918	No
32	ORC5	na			8364	0.015	-0.1923	No
33	POLA1	na			8394	0.014	-0.1931	No
34	RPA2	na			8398	0.014	-0.1924	No
35	POLA2	na			8491	0.011	-0.1969	No
36	PSMD7	na			8515	0.009	-0.1976	No
37	CDKN1B	na			8605	0.006	-0.2023	No
38	PSMD8	na			8705	0.002	-0.2077	No
39	PSMC6	na			8715	0.002	-0.2081	No
40	PSMD4	na			8737	0.001	-0.2092	No
41	ORC3	na			8813	-0.002	-0.2133	No
42	PSME1	na			9304	-0.020	-0.2397	No
43	PSMB6	na			9385	-0.024	-0.2427	No
44	POLD4	na			9774	-0.039	-0.2622	No
45	CDC6	na			9800	-0.040	-0.2611	No
46	PSMD12	na			9918	-0.044	-0.2649	No
47	POLD3	na			9942	-0.046	-0.2634	No
48	PSMB4	na			10214	-0.056	-0.2752	No
49	PSMB2	na			10326	-0.060	-0.2777	No
50	PSME2	na			10524	-0.068	-0.2845	No
51	PRIM2	na			10559	-0.070	-0.2821	No
52	PSMA7	na			10589	-0.071	-0.2793	No
53	PSMB1	na			10605	-0.071	-0.2757	No
54	PSMC5	na			10658	-0.074	-0.2741	No
55	CCNA2	na			10675	-0.075	-0.2703	No
56	RPS27A	na			10937	-0.086	-0.2797	No
57	PSMA3	na			10972	-0.087	-0.2762	No
58	PCNA	na			11127	-0.093	-0.2791	No
59	RFC4	na			11359	-0.104	-0.2857	Yes
60	ORC4	na			11403	-0.106	-0.2815	Yes
61	MAX	na			11546	-0.112	-0.2826	Yes
62	PSMD9	na			11564	-0.113	-0.2765	Yes
63	MNAT1	na			11604	-0.115	-0.2715	Yes
64	PSMA2	na			11684	-0.119	-0.2686	Yes
65	MCM5	na			11718	-0.120	-0.2630	Yes
66	PSMB8	na			11730	-0.121	-0.2561	Yes
67	ORC6	na			11735	-0.121	-0.2488	Yes
68	ORC1	na			11761	-0.122	-0.2426	Yes
69	MCM3	na			11801	-0.124	-0.2371	Yes
70	CCNE1	na			11903	-0.129	-0.2348	Yes
71	GINS4	na			12010	-0.134	-0.2324	Yes
72	PSMC3	na			12055	-0.136	-0.2265	Yes
73	PSMB7	na			12106	-0.138	-0.2207	Yes
74	RPA1	na			12156	-0.142	-0.2146	Yes
75	CDK4	na			12180	-0.143	-0.2070	Yes
76	PSMB3	na			12273	-0.148	-0.2030	Yes
77	RFC5	na			12490	-0.160	-0.2053	Yes
78	GINS2	na			12855	-0.180	-0.2146	Yes
79	CDC45	na			12880	-0.182	-0.2046	Yes
80	MYC	na			12909	-0.184	-0.1948	Yes
81	POLE	na			12946	-0.186	-0.1852	Yes
82	UBA52	na			13082	-0.195	-0.1807	Yes
83	MCM7	na			13111	-0.197	-0.1700	Yes
84	SKP2	na			13137	-0.199	-0.1591	Yes
85	WEE1	na			13293	-0.209	-0.1548	Yes
86	GINS1	na			13321	-0.211	-0.1432	Yes
87	FEN1	na			13484	-0.222	-0.1386	Yes
88	MCM4	na			13591	-0.230	-0.1303	Yes
89	CCNE2	na			13664	-0.236	-0.1197	Yes
90	MCM6	na			13731	-0.241	-0.1084	Yes
91	POLE2	na			13778	-0.246	-0.0957	Yes
92	CKS1B	na			13917	-0.256	-0.0876	Yes
93	POLD2	na			14064	-0.270	-0.0790	Yes
94	PRIM1	na			14247	-0.287	-0.0714	Yes
95	CDK2	na			14296	-0.292	-0.0560	Yes
96	LIG1	na			14442	-0.308	-0.0449	Yes
97	DNA2	na			14447	-0.309	-0.0259	Yes
98	RPA3	na			14591	-0.326	-0.0138	Yes
99	POLD1	na			14892	-0.363	-0.0081	Yes
100	CCNA1	na			14986	-0.376	0.0101	Yes
101	MCM2	na			15059	-0.385	0.0300	Yes
102	PSMB10	na			15077	-0.388	0.0532	Yes
103	CDT1	na			15105	-0.393	0.0761	Yes
104	PSMB9	na			15528	-0.462	0.0811	Yes
105	CUL1	na			16697	-0.792	0.0645	Yes

Fig 2: REACTOME_S_PHASE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: REACTOME_S_PHASE: Random ES distribution   
Gene set null distribution of ES for REACTOME_S_PHASE