Details for gene set ST_TUMOR_NECROSIS_FACTOR_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	normalized_counts_per_kilobase_for_GSEA_2.class_2.cls #AHRR-overexpressed_versus_Control
Phenotype	class_2.cls#AHRR-overexpressed_versus_Control
Upregulated in class	AHRR-overexpressed
GeneSet	ST_TUMOR_NECROSIS_FACTOR_PATHWAY
Enrichment Score (ES)	0.5179288
Normalized Enrichment Score (NES)	1.671096
Nominal p-value	0.0
FDR q-value	0.28746632
FWER p-Value	0.491

Fig 1: Enrichment plot: ST_TUMOR_NECROSIS_FACTOR_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	JUN	na			580	1.458	0.1500	Yes
2	TNFRSF1B	na			679	1.324	0.3103	Yes
3	TNFAIP3	na			1750	0.649	0.3315	Yes
4	CFLAR	na			2308	0.489	0.3614	Yes
5	BAG4	na			2807	0.393	0.3827	Yes
6	MAP3K3	na			2970	0.365	0.4193	Yes
7	NFKBIA	na			3178	0.332	0.4492	Yes
8	MAP3K7	na			3858	0.255	0.4431	Yes
9	CASP8	na			3981	0.244	0.4668	Yes
10	RIPK1	na			4171	0.227	0.4846	Yes
11	MAP2K4	na			4491	0.202	0.4920	Yes
12	AGFG1	na			4530	0.199	0.5148	Yes
13	BIRC2	na			4866	0.175	0.5179	Yes
14	TNF	na			5334	0.147	0.5101	No
15	BIRC3	na			6183	0.104	0.4755	No
16	NR2C2	na			6697	0.082	0.4569	No
17	NFKBIL1	na			7892	0.033	0.3940	No
18	NFKB1	na			7942	0.032	0.3952	No
19	FADD	na			8656	0.004	0.3557	No
20	IKBKG	na			8880	-0.005	0.3438	No
21	TRADD	na			9032	-0.010	0.3366	No
22	NFKBIB	na			9077	-0.012	0.3356	No
23	TNFRSF1A	na			9206	-0.016	0.3305	No
24	NFKBIE	na			9588	-0.032	0.3130	No
25	CASP3	na			10208	-0.056	0.2853	No
26	RALBP1	na			11537	-0.112	0.2248	No
27	TRAF2	na			13880	-0.254	0.1251	No
28	NFKB2	na			15039	-0.383	0.1081	No
29	TONSL	na			15102	-0.393	0.1538	No

Fig 2: ST_TUMOR_NECROSIS_FACTOR_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: ST_TUMOR_NECROSIS_FACTOR_PATHWAY: Random ES distribution   
Gene set null distribution of ES for ST_TUMOR_NECROSIS_FACTOR_PATHWAY