Information for motif1


Reverse Opposite:

p-value:1e-20
log p-value:-4.794e+01
Information Content per bp:1.848
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.9 +/- 47.9bp
Average Position of motif in Background68.2 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0095.1_YY1/Jaspar

Match Rank:1
Score:0.67
Offset:6
Orientation:forward strand
Alignment:GCTGGAACCATC
------GCCATC

HRE(HSF)/HepG2-HSF1-ChIP-Seq/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCTGGAACCATC-----
NNTTCTGGAANNTTCTAGAA

MA0035.1_Gata1/Jaspar

Match Rank:3
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:GCTGGAACCATC-
-------CCATCN

MA0111.1_Spz1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTGGAACCATC
GCTGTTACCCT-

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCTGGAACCATC-
NNGATCTAGAACCTNNN

ETS:E-box/HPC7-Scl-ChIP-Seq/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTGGAACCATC--
--AGGAAACAGCTG

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTGGAACCATC----
TTTAGAACAATAAAAT

MA0087.1_Sox5/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCTGGAACCATC
----AAACAAT-

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTGGAACCATC----
TTAAGAACAATAAATT

MA0036.1_GATA2/Jaspar

Match Rank:10
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GCTGGAACCATC-
--------TATCN