Information for motif11


Reverse Opposite:

p-value:1e-14
log p-value:-3.242e+01
Information Content per bp:1.646
Number of Target Sequences with motif1152.0
Percentage of Target Sequences with motif10.77%
Number of Background Sequences with motif3397.3
Percentage of Background Sequences with motif8.61%
Average Position of motif in Targets102.6 +/- 54.9bp
Average Position of motif in Background100.2 +/- 55.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATGGTGTAAA----
GAAAAGGTGTGAAAATT

Eomes(T-box)/H9-Eomes-ChIP-Seq/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATGGTGTAAA-
-AGGTGTTAAN

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATGGTGTAAA----
AGGACGCTGTAAAGGGA

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATGGTGTAAA
ATGGGGTGAT

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATGGTGTAAA----
AAGACGCTGTAAAGCGA

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATGGTGTAAA
NATGTTGCAA-

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATGGTGTAAA
RGATGATGCAAT

MA0095.1_YY1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATGGTGTAAA
GATGGC-----

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATGGTGTAAA-
-AGGTGTGAAM

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGGTGTAAA
ATGATGCAAT