Information for motif15


Reverse Opposite:

p-value:1e-13
log p-value:-3.140e+01
Information Content per bp:1.833
Number of Target Sequences with motif1117.0
Percentage of Target Sequences with motif10.45%
Number of Background Sequences with motif3294.9
Percentage of Background Sequences with motif8.35%
Average Position of motif in Targets100.5 +/- 55.8bp
Average Position of motif in Background100.5 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq/Homer

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GACTAAAA--
ACCGTGACTAATTNN

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GACTAAAA-----
ATTTACGACAAATAGC

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GACTAAAA--
GAATGACGAATAAC

MA0151.1_ARID3A/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GACTAAAA
-ATTAAA-

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GACTAAAA
BCAGACWA---

MA0099.1_Fos/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GACTAAAA
GTGAGTCA--

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------GACTAAAA--
TTAGAGGGATTAACAAT

MA0052.1_MEF2A/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GACTAAAA----
--CTATAAATAG

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GACTAAAA
TTGCCCGGATTAGG-

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GACTAAAA----
CTACCAATAAAATTCT