Information for motif16


Reverse Opposite:

p-value:1e-12
log p-value:-2.948e+01
Information Content per bp:1.698
Number of Target Sequences with motif586.0
Percentage of Target Sequences with motif5.48%
Number of Background Sequences with motif1585.8
Percentage of Background Sequences with motif4.02%
Average Position of motif in Targets100.7 +/- 55.7bp
Average Position of motif in Background102.4 +/- 54.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0132.1_Pdx1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GAAAATTAGCTG
---AATTAG---

MA0075.1_Prrx2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GAAAATTAGCTG
---AATTA----

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAAAATTAGCTG--
GACGATAATGAGCTTGC

PH0032.1_Evx2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GAAAATTAGCTG--
ANCGCTAATTAGCGGTN

PH0074.1_Hoxd1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAAAATTAGCTG--
TAAACTAATTAGCTGTA

PH0036.1_Gsx2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAAATTAGCTG--
AGGTTAATTAGCTGAT

PH0024.1_Dlx5/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAAAATTAGCTG--
GGGGTAATTAGCTCTG

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAAAATTAGCTG--
AAACATAATGAGGTTGC

PH0045.1_Hoxa1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAAAATTAGCTG--
ACGGTAATTAGCTCAG

PH0009.1_Bsx/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAAAATTAGCTG--
CAGGTAATTACCTCAG