Information for motif19


Reverse Opposite:

p-value:1e-12
log p-value:-2.797e+01
Information Content per bp:1.651
Number of Target Sequences with motif302.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif722.5
Percentage of Background Sequences with motif1.83%
Average Position of motif in Targets101.6 +/- 56.5bp
Average Position of motif in Background98.3 +/- 56.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCGATATGAT------
-NNATNTGATANNNNN

PB0125.1_Gata3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCGATATGAT--------
NNNNNCGATANNATCTNNNNAN

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCGATATGAT-----
NNNNNBAGATAWYATCTVHN

MA0029.1_Evi1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCGATATGAT----
AAGATAAGATAACA

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCGATATGAT
----CATGAC

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGATATGAT---
TAAACTGATAAGAAGAT

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCGATATGAT--------
-TNNNATGATTTCNNCNN

MA0035.1_Gata1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CCGATATGAT--
------GGATGG

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCGATATGAT-----
---RGATGATGCAAT

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCGATATGAT
NBWGATAAGR-