Information for motif24


Reverse Opposite:

p-value:1e-10
log p-value:-2.479e+01
Information Content per bp:1.543
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets101.4 +/- 52.6bp
Average Position of motif in Background40.4 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0036.1_GATA2/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GCATAGTATC-
------TATCN

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCATAGTATC---
CCGCATAGCAACGGA

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCATAGTATC--
SCCTAGCAACAG

MA0032.1_FOXC1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCATAGTATC
GGTAAGTA--

MA0037.1_GATA3/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCATAGTATC-
-----CTATCN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCATAGTATC-
---YSTTATCT

MA0035.1_Gata1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCATAGTATC-
-----CCATCN

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCATAGTATC---
TACCATAGCAACGGT

PB0105.1_Arid3a_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCATAGTATC------
-ACCCGTATCAAATTT

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCATAGTATC----
ATGTACAGTAGCAAAG