Information for motif25


Reverse Opposite:

p-value:1e-10
log p-value:-2.457e+01
Information Content per bp:1.811
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets99.1 +/- 52.6bp
Average Position of motif in Background121.4 +/- 45.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CCCTCAGCGT
NCGTCAGC--

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCCTCAGCGT
TGAGTCAGCA-

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCCTCAGCGT
----CAGCC-

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCCTCAGCGT--
GCCTCAGGGCAT

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCTCAGCGT----
CCACACAGCAGGAGA

AP2gamma(AP2)/MCF7-TFAP2c-ChIP-Seq/Homer

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCCTCAGCGT-
NNTGCCCTCAGGGCA

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCTCAGCGT----
CCACACAGCAGGAGA

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCTCAGCGT----
HWWGTCAGCAWWTTT

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCCTCAGCGT----
GAGCACAGCAGGACA

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCCTCAGCGT
--CACAGN--