Information for motif27


Reverse Opposite:

p-value:1e-10
log p-value:-2.322e+01
Information Content per bp:1.868
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.2 +/- 42.7bp
Average Position of motif in Background105.6 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CWKATCTTCAGA----
-AGATGKDGAGATAAG

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CWKATCTTCAGA
AACAGATGGTCN--

POL002.1_INR/Jaspar

Match Rank:3
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CWKATCTTCAGA---
-------TCAGTCTT

STAT6/Macrophage-Stat6-ChIP-Seq/Homer

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CWKATCTTCAGA-
---TTCCKNAGAA

PB0023.1_Gata6_1/Jaspar

Match Rank:5
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CWKATCTTCAGA
NNANTCTTATCTNNNNN

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CWKATCTTCAGA--
CTAATATTGCTAAA

Gata2(Zf)/K562-GATA2-ChIP-Seq/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CWKATCTTCAGA
NNCTTATCTN----

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.50
Offset:-8
Orientation:reverse strand
Alignment:--------CWKATCTTCAGA--
NNTNANTTCTTATCTCTANANN

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------CWKATCTTCAGA--
TTTTTTTTTTTTTTCAGGTT

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CWKATCTTCAGA-----
-------CCAGACRSVB