Information for motif29


Reverse Opposite:

p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.764
Number of Target Sequences with motif145.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif304.9
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets99.0 +/- 56.3bp
Average Position of motif in Background99.3 +/- 56.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HEB?/mES-Nanog-ChIP-Seq/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCTCCTGCTT--
CCCCCTGCTGTG

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCTCCTGCTT
ACATCCTGNT-

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCTCCTGCTT
NNCACCTGNN-

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCTGCTT
ACTTCCTGTT-

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTCCTGCTT-----
TNTCCTGCTGTGNNG

Znf263(Zf)/K562-Znf263-ChIP-Seq/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCTCCTGCTT
CNGTCCTCCC----

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCTGCTT
ACTTCCTBGT-

ERG(ETS)/VCaP-ERG-ChIP-Seq/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTCCTGCTT
CACTTCCTGT--

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTCCTGCTT-----
TCNCCTGCTGNGNNN

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTCCTGCTT
CACTTCCTGT--