| p-value: | 1e-9 |
| log p-value: | -2.172e+01 |
| Information Content per bp: | 1.968 |
| Number of Target Sequences with motif | 10.0 |
| Percentage of Target Sequences with motif | 0.09% |
| Number of Background Sequences with motif | 2.6 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 115.7 +/- 63.0bp |
| Average Position of motif in Background | 113.8 +/- 57.1bp |
| Strand Bias (log2 ratio + to - strand density) | -0.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PH0078.1_Hoxd13/Jaspar
| Match Rank: | 1 |
| Score: | 0.68
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------ATAAAACTGTAA
CTACCAATAAAATTCT-- |
|
|
|
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 2 |
| Score: | 0.65
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----ATAAAACTGTAA
NCYAATAAAA------ |
|
|
|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq/Homer
| Match Rank: | 3 |
| Score: | 0.65
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---ATAAAACTGTAA
GTCATAAAAN----- |
|
|
|
PH0075.1_Hoxd10/Jaspar
| Match Rank: | 4 |
| Score: | 0.65
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------ATAAAACTGTAA
AATGCAATAAAATTTAT- |
|
|
|
PB0146.1_Mafk_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.63
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -ATAAAACTGTAA--
GAAAAAATTGCAAGG |
|
|
|
MF0009.1_TRP(MYB)_class/Jaspar
| Match Rank: | 6 |
| Score: | 0.62
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | ATAAAACTGTAA
----AACCGANA |
|
|
|
PH0056.1_Hoxa9/Jaspar
| Match Rank: | 7 |
| Score: | 0.61
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------ATAAAACTGTAA
ACGGCCATAAAATTAAT- |
|
|
|
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 8 |
| Score: | 0.61
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------ATAAAACTGTAA
AGAGCCATAAAATTCG-- |
|
|
|
PH0013.1_Cdx2/Jaspar
| Match Rank: | 9 |
| Score: | 0.61
| | Offset: | -7
| | Orientation: | forward strand |
| Alignment: | -------ATAAAACTGTAA
AAAGGTAATAAAATTT--- |
|
|
|
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER
| Match Rank: | 10 |
| Score: | 0.60
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | ATAAAACTGTAA--
--GAAACTGAAACT |
|
|
|
