Information for motif32


Reverse Opposite:

p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.855
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets79.2 +/- 51.6bp
Average Position of motif in Background105.0 +/- 53.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0077.1_Spdef_1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACACCCGGGT----
GTACATCCGGATTTTT

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACACCCGGGT----
CCCCCCCGGGGGGGT

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACACCCGGGT
ACATCCTGNT

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACACCCGGGT------
AGAGCGGGGTCAAGTA

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACACCCGGGT----
NNNNATGCGGGTNNNN

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACACCCGGGT----
CCCCCCCGGGGGGGT

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACACCCGGGT
NNCACCTGNN-

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ACACCCGGGT
GGCCACACCCAN--

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACACCCGGGT---
CACCCCCGGGGGGG

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACACCCGGGT--
ACCACTCTCGGTCAC