Information for motif36


Reverse Opposite:

p-value:1e-7
log p-value:-1.699e+01
Information Content per bp:1.889
Number of Target Sequences with motif162.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif380.8
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets97.2 +/- 58.4bp
Average Position of motif in Background100.3 +/- 57.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----STGGTACC----
GCTGGGGGGTACCCCTT

PB0059.1_Six6_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----STGGTACC-----
ANANNTGATACCCNATN

PH0162.1_Six2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----STGGTACC-----
ANANGTGATACCCCATT

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----STGGTACC-----
ANNNATGATACCCCATC

MA0111.1_Spz1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-STGGTACC--
GCTGTTACCCT

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----STGGTACC-----
ANANGTGATACCCTATN

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----STGGTACC-----
ANANNTGATACCCTATN

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----STGGTACC-----
AATNTTGATACCCTATN

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--STGGTACC
GGGCGGGACC

MA0032.1_FOXC1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:STGGTACC----
----TACTNNNN