Information for motif37


Reverse Opposite:

p-value:1e-6
log p-value:-1.598e+01
Information Content per bp:1.704
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets124.1 +/- 52.9bp
Average Position of motif in Background156.1 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGCCCGGC
TGACCTTTGCCCTA-

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGCCCGGC
TGACCTTTGCCCTAN

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTGCCCGGC
NNGCNCTGCGCGGC

PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCTCTGCCCGGC
TGACCTTTGCCCCA-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCTCTGCCCGGC
CCCCCCCC----

MA0114.1_HNF4A/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGCCCGGC
TGACCTTTGNCCT--

TR4(NR/DR1)/Hela-TR4-ChIP-Seq/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGCCCGGC
TGACCTTTGACCTC-

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------CCTCTGCCCGGC
CCNNACCATCTGGCCTN-

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCTCTGCCCGGC---
TCACCCCGCCCCAAATT

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCTCTGCCCGGC----
----GGCCCCGCCCCC