Information for motif39


Reverse Opposite:

p-value:1e-6
log p-value:-1.561e+01
Information Content per bp:1.823
Number of Target Sequences with motif1044.0
Percentage of Target Sequences with motif9.76%
Number of Background Sequences with motif3297.9
Percentage of Background Sequences with motif8.36%
Average Position of motif in Targets97.9 +/- 56.8bp
Average Position of motif in Background102.2 +/- 57.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TCCCTAGC-
----CAGCC

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCCCTAGC----
ATTTACAGTAGCAAAA

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCCCTAGC----
ATGTACAGTAGCAAAG

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCCCTAGC----------
TGTGACCCTTAGCAACCGATTAA

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCCCTAGC
TCCCCA--

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCCCTAGC------
TACCATAGCAACGGT

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCCCTAGC----
NNNTTAGGTAGCNTNT

MA0154.1_EBF1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCCCTAGC--
TCCCTTGGGT

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCCCTAGC----
NNTGTAGGTAGCANNT

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCCCTAGC
--CGGAGC