Information for motif43


Reverse Opposite:

p-value:1e-2
log p-value:-5.978e+00
Information Content per bp:1.623
Number of Target Sequences with motif270.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif836.7
Percentage of Background Sequences with motif2.12%
Average Position of motif in Targets106.5 +/- 57.0bp
Average Position of motif in Background102.2 +/- 49.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGGCCGCG
AGGCCTAG

MA0003.1_TFAP2A/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGGCCGCG---
--GCCCGGGGG

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CGGCCGCG--
AGCAACAGCCGCACC

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGGCCGCG--
--GGCGCGCT

MA0146.1_Zfx/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCGCG-----
CAGGCCNNGGCCNN

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGGCCGCG--------
--GCCGCGCAGTGCGT

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGGCCGCG----
TCACCCCGCCCCAAATT

MA0104.2_Mycn/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGCCGCG----
--GCCACGTGCN

MA0131.1_MIZF/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGGCCGCG
TAACGTCCGC-

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGGCCGCG
YAACBGCC---