Information for motif7


Reverse Opposite:

p-value:1e-15
log p-value:-3.655e+01
Information Content per bp:1.771
Number of Target Sequences with motif516.0
Percentage of Target Sequences with motif4.83%
Number of Background Sequences with motif1306.2
Percentage of Background Sequences with motif3.31%
Average Position of motif in Targets103.8 +/- 57.1bp
Average Position of motif in Background99.9 +/- 55.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTACTC
NYYTGTTTACHN

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCTCTACTC-
-TGTTTACTTT

PRDM14(Zf)/H1-PRDM14-ChIP-Seq/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTACTC
AGGTCTCTAACC

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCTCTACTC-
-TGTTTACTTT

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTACTC-
NNAATTCTCGNTNAN

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCTCTACTC
-TGTTTATTT

MA0148.1_FOXA1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTCTCTACTC--
-TGTTTACTTTG

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCTCTACTC
CTGTTTAC--

MA0029.1_Evi1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCTACTC--
TNTTATCTTATCTT

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTCTCTACTC
AASCACTCAA---