Information for motif8


Reverse Opposite:

p-value:1e-15
log p-value:-3.647e+01
Information Content per bp:1.534
Number of Target Sequences with motif265.0
Percentage of Target Sequences with motif2.48%
Number of Background Sequences with motif567.6
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets105.2 +/- 57.8bp
Average Position of motif in Background102.1 +/- 56.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:forward strand
Alignment:AGTAKCATTC--
----TCAGTCTT

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGTAKCATTC
ADGGYAGYAGCATCT

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGTAKCATTC----
----RCATTCCWGG

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGTAKCATTC-----
GAAGATCAATCACTTA

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGTAKCATTC
---GTCATN-

MA0067.1_Pax2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGTAKCATTC
--AGTCACGC

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGTAKCATTC--
--AAGCACTTAA

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGTAKCATTC----
----GCATTCCAGN

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGTAKCATTC
ATTGCATCATCY

MA0090.1_TEAD1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGTAKCATTC-----
---CACATTCCTCCG