Information for 12-GTGTATTGAGTA (Motif 11)

A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C
p-value:1e-14
log p-value:-3.428e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif8.45%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets687.8 +/- 4.2bp
Average Position of motif in Background2118.3 +/- 2251.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTGTATTGAGTA
NNTGTGGATTSS---
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T C G T A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T

CUX1/MA0754.3/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTGTATTGAGTA
---TATCGATTA
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T C G T A
A C G T A C G T A C G T C G A T T C G A G A C T G A T C T C A G T C G A G A C T G A C T C T G A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GTGTATTGAGTA
---TATTGAYY-
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T C G T A
A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T

ONECUT1/MA0679.3/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTGTATTGAGTA
---TATTGATTT
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T C G T A
A C G T A C G T A C G T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T

FOXH1/MA0479.2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGTATTGAGTA
TGTGGATT-----
 A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T C G T A
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-5/MA0063.3/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GTGTATTGAGTA
-----TTGAGTG
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T A G C G T A C T A G G A C T C T A G

Hoxd13/MA0909.4/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTGTATTGAGTA
-TTTATTG----
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T C G T A
A C G T C A G T C A G T G C A T T G C A C G A T G A C T T C A G A C G T A C G T A C G T A C G T

CUX2/MA0755.2/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTGTATTGAGTA
---TATCGATTA
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T C G T A
A C G T A C G T A C G T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A

POU6F1/MA1549.2/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTGTATTGAGTA
---TAATGAG--
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T C G T A
A C G T A C G T A C G T G A C T T C G A C G T A A C G T A C T G G C T A A C T G A C G T A C G T

MSANTD3/MA1523.2/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GTGTATTGAGTA
-----GTGAGTG
 A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G