Information for 1-RTACTGAGGC (Motif 12)

C T G A A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C A C G T A G T C C G T A C T A G A C G T C G T A A G C T
p-value:1e-14
log p-value:-3.318e+01
Information Content per bp:1.916
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif21.13%
Number of Background Sequences with motif238.1
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets350.5 +/- 489.1bp
Average Position of motif in Background1825.6 +/- 2045.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF770/MA2099.1/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:RTACTGAGGC--
----TGAGGCCG
 C T G A A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C A G T T A C G T G C A T A C G T A C G G A T C A G T C T C A G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----RTACTGAGGC---
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A C G T C T G A A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

POU6F1/MA1549.2/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:RTACTGAGGC
-TAATGAG--
 C T G A A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C T G A T G C
A C G T G A C T T C G A C G T A A C G T A C T G G C T A A C T G A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----RTACTGAGGC---
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C G T C T G A A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

TFAP2C/MA0814.3/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:RTACTGAGGC
-GCCTGAGGC
 C T G A A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C T G A T G C
A C G T A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:RTACTGAGGC--
--HAWGRGGCCM
 C T G A A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C G T
A C G T A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

POU6F2/MA0793.2/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:RTACTGAGGC
-TAATGAGCT
 C T G A A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C T G A T G C
A C G T C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

TFAP2A/MA0003.5/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:RTACTGAGGC
-GCCTGAGGC
 C T G A A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C T G A T G C
A C G T A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C

PB0197.1_Zfp105_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----RTACTGAGGC--
NAAANTTATTGAANCAN
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

RUNX3/MA0684.3/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:RTACTGAGGC-
---TTGAGGTT
 C T G A A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T
A C G T A C G T A C G T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T