Information for 19-ACCTAAGCTTAG (Motif 18)

C G T A G T A C A G T C A C G T C G T A C G T A A C T G A G T C A C G T A C G T C G T A C T A G
Reverse Opposite:
A G T C A C G T C G T A C G T A A C T G A G T C A C G T A C G T C G T A C T A G A C T G A C G T
p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.932
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif8.45%
Number of Background Sequences with motif15.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets739.7 +/- 3.0bp
Average Position of motif in Background3377.1 +/- 3784.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.2/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:forward strand
Alignment:ACCTAAGCTTAG
----AAGCTT--
 C G T A G T A C A G T C A C G T C G T A C G T A A C T G A G T C A C G T A C G T C G T A C T A G
A C G T A C G T A C G T A C G T C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

GATA1/MA0035.5/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACCTAAGCTTAG
--CTAATCT---
 C G T A G T A C A G T C A C G T C G T A C G T A A C T G A G T C A C G T A C G T C G T A C T A G
A C G T A C G T G T A C C G A T C G T A G C T A G C A T G T A C G C A T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ACCTAAGCTTAG-
-----GGATTAGC
 C G T A G T A C A G T C A C G T C G T A C G T A A C T G A G T C A C G T A C G T C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

IRF6/MA1509.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACCTAAGCTTAG
ACCGAAACT---
 C G T A G T A C A G T C A C G T C G T A C G T A A C T G A G T C A C G T A C G T C G T A C T A G
T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACCTAAGCTTAG
CAAAATCGAAACTAA-
 A C G T A C G T A C G T A C G T C G T A G T A C A G T C A C G T C G T A C G T A A C T G A G T C A C G T A C G T C G T A C T A G
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ACCTAAGCTTAG
----RGGATTAR
 C G T A G T A C A G T C A C G T C G T A C G T A A C T G A G T C A C G T A C G T C G T A C T A G
A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ACCTAAGCTTAG----
AAAATATGCATAATAAA
 A C G T C G T A G T A C A G T C A C G T C G T A C G T A A C T G A G T C A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

NR2F2/MA1111.2/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:ACCTAAGCTTAG
---TGACCTT--
 C G T A G T A C A G T C A C G T C G T A C G T A A C T G A G T C A C G T A C G T C G T A C T A G
A C G T A C G T A C G T G A C T C T A G T G C A G A T C G T A C G A C T G C A T A C G T A C G T

MEF2A/MA0052.5/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:ACCTAAGCTTAG
--CTAAAAATAG
 C G T A G T A C A G T C A C G T C G T A C G T A A C T G A G T C A C G T A C G T C G T A C T A G
A C G T A C G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G

Six4/MA2001.2/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:ACCTAAGCTTAG
----AACCTGA-
 C G T A G T A C A G T C A C G T C G T A C G T A A C T G A G T C A C G T A C G T C G T A C T A G
A C G T A C G T A C G T A C G T G T C A G C T A G A T C G T A C A G C T T A C G G T C A A C G T