Information for 11-AGKATTMTAD (Motif 20)

C T G A T A C G A C G T C T G A A C G T A C G T T G A C C G A T G C T A C G A T
Reverse Opposite:
G C T A C G A T G C T A A C T G T G C A T G C A G A C T T G C A A T G C G A C T
p-value:1e-8
log p-value:-1.857e+01
Information Content per bp:1.533
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif15.49%
Number of Background Sequences with motif308.9
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets232.2 +/- 123.1bp
Average Position of motif in Background1661.9 +/- 1954.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF35/MA2333.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AGKATTMTAD
--AATTCTA-
 C T G A T A C G A C G T C T G A A C G T A C G T T G A C C G A T G C T A C G A T
A C G T A C G T G C T A C G T A G C A T G A C T T G A C G C A T C G T A A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGKATTMTAD-----
TAAGATTATAATACGG
 A C G T C T G A T A C G A C G T C T G A A C G T A C G T T G A C C G A T G C T A C G A T A C G T A C G T A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGKATTMTAD-----
NANTATTATAATTNNN
 A C G T C T G A T A C G A C G T C T G A A C G T A C G T T G A C C G A T G C T A C G A T A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGKATTMTAD-----
AGNGTTCTAATGANN
 C T G A T A C G A C G T C T G A A C G T A C G T T G A C C G A T G C T A C G A T A C G T A C G T A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

PB0069.1_Sox21_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGKATTMTAD-----
TTTAATTATAATTAAG
 A C G T C T G A T A C G A C G T C T G A A C G T A C G T T G A C C G A T G C T A C G A T A C G T A C G T A C G T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

OTX2/MA0712.3/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGKATTMTAD
GGGATTA---
 C T G A T A C G A C G T C T G A A C G T A C G T T G A C C G A T G C T A C G A T
C T A G C T A G C T A G G T C A C A G T G C A T C G T A A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGKATTMTAD-----
NNTAATTATAATTNNN
 A C G T C T G A T A C G A C G T C T G A A C G T A C G T T G A C C G A T G C T A C G A T A C G T A C G T A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

GSC/MA0648.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGKATTMTAD
-GGATTA---
 C T G A T A C G A C G T C T G A A C G T A C G T T G A C C G A T G C T A C G A T
A C G T T C A G T C A G T G C A A C G T G A C T C T G A A C G T A C G T A C G T

GSC2/MA0891.2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGKATTMTAD
-GGATTA---
 C T G A T A C G A C G T C T G A A C G T A C G T T G A C C G A T G C T A C G A T
A C G T T C A G C A T G T G C A C G A T C G A T C G T A A C G T A C G T A C G T

Crx/MA0467.3/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGKATTMTAD
-GGATTA---
 C T G A T A C G A C G T C T G A A C G T A C G T T G A C C G A T G C T A C G A T
A C G T A T C G A C T G C G T A G A C T G C A T G C T A A C G T A C G T A C G T