Information for 22-AMTTCATTTGSC (Motif 22)

G T C A G T C A A G C T A G C T A G T C C G T A A G C T C G A T C G A T A C T G A T G C A T G C
Reverse Opposite:
A T C G A T C G G T A C C G T A C G T A C T G A C G A T C T A G C T G A C T G A A C G T A C G T
p-value:1e-7
log p-value:-1.841e+01
Information Content per bp:1.737
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif8.45%
Number of Background Sequences with motif43.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets353.6 +/- 291.0bp
Average Position of motif in Background1414.0 +/- 2230.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.83
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7/MA0680.3/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AMTTCATTTGSC
TAATTGATTA---
 A C G T G T C A G T C A A G C T A G C T A G T C C G T A A G C T C G A T C G A T A C T G A T G C A T G C
G C A T C T G A G C T A G A C T A G C T T C A G C T G A G C A T G C A T C G T A A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AMTTCATTTGSC-
ACATTCATGACACG
 A C G T G T C A G T C A A G C T A G C T A G T C C G T A A G C T C G A T C G A T A C T G A T G C A T G C A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Lhx3/MA0135.2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AMTTCATTTGSC
ATTAATTAATTT---
 A C G T A C G T A C G T G T C A G T C A A G C T A G C T A G T C C G T A A G C T C G A T C G A T A C T G A T G C A T G C
C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AMTTCATTTGSC
TAATTGATTA---
 A C G T G T C A G T C A A G C T A G C T A G T C C G T A A G C T C G A T C G A T A C T G A T G C A T G C
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AMTTCATTTGSC
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T G T C A G T C A A G C T A G C T A G T C C G T A A G C T C G A T C G A T A C T G A T G C A T G C
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AMTTCATTTGSC
-TTTCATKGCC-
 G T C A G T C A A G C T A G C T A G T C C G T A A G C T C G A T C G A T A C T G A T G C A T G C
A C G T G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AMTTCATTTGSC
-TTTCATTRCC-
 G T C A G T C A A G C T A G C T A G T C C G T A A G C T C G A T C G A T A C T G A T G C A T G C
A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C A C G T

GFY(?)/Promoter/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AMTTCATTTGSC
ACTACAATTCCC
 G T C A G T C A A G C T A G C T A G T C C G T A A G C T C G A T C G A T A C T G A T G C A T G C
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

Mesp1(bHLH)/ESC-Mesp1-ChIP-Seq(GSE165102)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AMTTCATTTGSC
--RCCATTTGBY
 G T C A G T C A A G C T A G C T A G T C C G T A A G C T C G A T C G A T A C T G A T G C A T G C
A C G T A C G T T C G A T G A C G T A C C G T A A C G T G A C T A C G T A C T G A C T G A G C T

NFYB/MA0502.3/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AMTTCATTTGSC
---TCATTGGCC
 G T C A G T C A A G C T A G C T A G T C C G T A A G C T C G A T C G A T A C T G A T G C A T G C
A C G T A C G T A C G T A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C