Information for 6-GATGCAAC (Motif 27)

A C T G C G T A G A C T C T A G G T A C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A G T C C T G A A C G T A G T C
p-value:1e-4
log p-value:-1.063e+01
Information Content per bp:1.868
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif12.68%
Number of Background Sequences with motif452.9
Percentage of Background Sequences with motif2.18%
Average Position of motif in Targets818.4 +/- 867.3bp
Average Position of motif in Background1815.9 +/- 2751.8bp
Strand Bias (log2 ratio + to - strand density)-3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GATGCAAC
MTGATGCAAT
 A C G T A C G T A C T G C G T A G A C T C T A G G T A C C G T A C G T A A G T C
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GATGCAAC
ATGATGCAAT
 A C G T A C G T A C T G C G T A G A C T C T A G G T A C C G T A C G T A A G T C
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

ATF4/MA0833.3/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GATGCAAC
ATGATGCAAT
 A C G T A C G T A C T G C G T A G A C T C T A G G T A C C G T A C G T A A G T C
T C G A G C A T C A T G C T G A A G C T C T A G G A T C G T C A C G T A A G C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GATGCAAC
NATGTTGCAA-
 A C G T A C G T A C G T A C T G C G T A G A C T C T A G G T A C C G T A C G T A A G T C
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

CEBPG/MA1636.2/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GATGCAAC
ATGATGCAAT
 A C G T A C G T A C T G C G T A G A C T C T A G G T A C C G T A C G T A A G T C
T C G A C G A T C A T G C T G A G A C T C T A G G T A C G T C A C G T A A G C T

HLF/MA0043.4/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GATGCAAC
TTATGCAAC
 A C G T A C T G C G T A G A C T C T A G G T A C C G T A C G T A A G T C
G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C

Foxn1/MA1684.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GATGCAAC
GGACGC---
 A C G T A C T G C G T A G A C T C T A G G T A C C G T A C G T A A G T C
C T A G A C T G C G T A G T A C A C T G A G T C A C G T A C G T A C G T

POU5F1/MA1115.2/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GATGCAAC
-ATGCAAA
 A C T G C G T A G A C T C T A G G T A C C G T A C G T A A G T C
A C G T T C G A G A C T C T A G A G T C G C T A C T G A G C T A

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GATGCAAC
TTATGCAAT
 A C G T A C T G C G T A G A C T C T A G G T A C C G T A C G T A A G T C
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T

RFX7/MA1554.2/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GATGCAAC-
-TAGCAACG
 A C T G C G T A G A C T C T A G G T A C C G T A C G T A A G T C A C G T
A C G T G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G