Information for 24-WTYATTTTCATT (Motif 28)

C G T A C G A T A G C T C T G A A C G T C G A T A C G T A G C T G T A C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G C T G A C G T A C G T A C G T A A G C T C T G A C G T A G C A T
p-value:1e-4
log p-value:-1.025e+01
Information Content per bp:1.831
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif8.45%
Number of Background Sequences with motif178.7
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets687.5 +/- 188.9bp
Average Position of motif in Background1897.2 +/- 2544.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.83
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nfatc2/MA0152.3/Jaspar

Match Rank:1
Score:0.79
Offset:4
Orientation:reverse strand
Alignment:WTYATTTTCATT
----TTTCCATT
 C G T A C G A T A G C T C T G A A C G T C G A T A C G T A G C T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G A C T G A C T G T A C G A T C C G T A A G C T C A G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:WTYATTTTCATT
CTCATTTGCATW
 C G T A C G A T A G C T C T G A A C G T C G A T A C G T A G C T G T A C C G T A A C G T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:WTYATTTTCATT
BTVATTWGCATA
 C G T A C G A T A G C T C T G A A C G T C G A T A C G T A G C T G T A C C G T A A C G T A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

FOXD3/MA0041.3/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--WTYATTTTCATT
TGTTTATTTACNTT
 A C G T A C G T C G T A C G A T A G C T C T G A A C G T C G A T A C G T A G C T G T A C C G T A A C G T A C G T
G C A T C T A G G C A T C A G T C G A T C T G A G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G A T

POU2F3/MA0627.3/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:WTYATTTTCATT
---ATTTGCATA
 C G T A C G A T A G C T C T G A A C G T C G A T A C G T A G C T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:WTYATTTTCATT---
-----TTTCATTRCC
 C G T A C G A T A G C T C T G A A C G T C G A T A C G T A G C T G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

POU5F1/MA1115.2/Jaspar

Match Rank:7
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:WTYATTTTCATT
----TTTGCAT-
 C G T A C G A T A G C T C T G A A C G T C G A T A C G T A G C T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G A C T C G A T T C A G G A T C C T G A A G C T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-WTYATTTTCATT---
TNTAATTTGCATANNN
 A C G T C G T A C G A T A G C T C T G A A C G T C G A T A C G T A G C T G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.70
Offset:3
Orientation:forward strand
Alignment:WTYATTTTCATT-
---ATTTGCATAA
 C G T A C G A T A G C T C T G A A C G T C G A T A C G T A G C T G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:WTYATTTTCATT
---ATTTGCATA
 C G T A C G A T A G C T C T G A A C G T C G A T A C G T A G C T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A