Information for 9-AATTGTAC (Motif 29)

C G T A C G T A A C G T A C G T A C T G C G A T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C C G T A C G T A A C G T A C G T
p-value:1e-4
log p-value:-9.506e+00
Information Content per bp:1.952
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif16.90%
Number of Background Sequences with motif935.3
Percentage of Background Sequences with motif4.51%
Average Position of motif in Targets620.8 +/- 589.4bp
Average Position of motif in Background1871.2 +/- 2783.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----AATTGTAC-----
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G A T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AATTGTAC----
AAAATTGTTATGAA
 A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G A T C G T A A G T C A C G T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AATTGTAC----
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G A T C G T A A G T C A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

ZNF35/MA2333.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AATTGTAC
AATTCTA-
 C G T A C G T A A C G T A C G T A C T G C G A T C G T A A G T C
G C T A C G T A G C A T G A C T T G A C G C A T C G T A A C G T

LHX2/MA0700.3/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AATTGTAC
TAATTG---
 A C G T C G T A C G T A A C G T A C G T A C T G C G A T C G T A A G T C
C G A T C G T A G C T A C G A T C G A T C T A G A C G T A C G T A C G T

Msx3/MA0709.2/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AATTGTAC
TAATTG---
 A C G T C G T A C G T A A C G T A C G T A C T G C G A T C G T A A G T C
G C A T C T G A C G T A A C G T A G C T C T A G A C G T A C G T A C G T

MSX2/MA0708.3/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AATTGTAC
TAATTG---
 A C G T C G T A C G T A A C G T A C G T A C T G C G A T C G T A A G T C
A G C T C T G A C G T A A C G T A G C T C T A G A C G T A C G T A C G T

MSX1/MA0666.3/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AATTGTAC
TAATTG---
 A C G T C G T A C G T A A C G T A C G T A C T G C G A T C G T A A G T C
A G C T C T G A C G T A A C G T A G C T C T A G A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----AATTGTAC----
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G A T C G T A A G T C A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

DLX1/MA0879.3/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AATTGTAC
TAATTG---
 A C G T C G T A C G T A A C G T A C G T A C T G C G A T C G T A A G T C
G C A T T C G A C G T A A C G T A C G T C T A G A C G T A C G T A C G T