Information for 24-GAGARRAGAA (Motif 31)

C T A G C G T A A C T G C G T A C T A G C T G A C G T A A C T G C G T A C T G A
Reverse Opposite:
A G C T A C G T A G T C A C G T A G C T A G T C A C G T A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.768e+00
Information Content per bp:1.853
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif8.45%
Number of Background Sequences with motif282.3
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets92.5 +/- 61.5bp
Average Position of motif in Background1757.7 +/- 2256.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata3/MA0037.5/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GAGARRAGAA
-AGATAAGA-
 C T A G C G T A A C T G C G T A C T A G C T G A C G T A A C T G C G T A C T G A
A C G T C G T A C T A G G C T A C G A T G C T A C T G A T A C G T C G A A C G T

TRPS1/MA1970.2/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GAGARRAGAA
-AGATAAGA-
 C T A G C G T A A C T G C G T A C T A G C T G A C G T A A C T G C G T A C T G A
A C G T C G T A T C A G C G T A G A C T C G T A C G T A T C A G T C G A A C G T

GATA6/MA1104.3/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GAGARRAGAA
-AGATAAGA-
 C T A G C G T A A C T G C G T A C T A G C T G A C G T A A C T G C G T A C T G A
A C G T C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:4
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------GAGARRAGAA------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C T G C G T A C T A G C T G A C G T A A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAGARRAGAA
NAGATAAGNN
 C T A G C G T A A C T G C G T A C T A G C T G A C G T A A C T G C G T A C T G A
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GAGARRAGAA
NVAGATAAGR-
 A C G T C T A G C G T A A C T G C G T A C T A G C T G A C G T A A C T G C G T A C T G A
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GAGARRAGAA---
TATAGAGATAAGAATTG
 A C G T A C G T A C G T A C G T C T A G C G T A A C T G C G T A C T A G C T G A C G T A A C T G C G T A C T G A A C G T A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGARRAGAA
CAGATAAGGN
 C T A G C G T A A C T G C G T A C T A G C T G A C G T A A C T G C G T A C T G A
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

GATA4/MA0482.3/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GAGARRAGAA
-AGATAAGG-
 C T A G C G T A A C T G C G T A C T A G C T G A C G T A A C T G C G T A C T G A
A C G T C G T A T C A G C G T A C A G T C G T A C G T A C T A G T C A G A C G T

GATA2/MA0036.4/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GAGARRAGAA
-AGATAAG--
 C T A G C G T A A C T G C G T A C T A G C T G A C G T A A C T G C G T A C T G A
A C G T C G T A T C A G C G T A G C A T C G T A C G T A T C A G A C G T A C G T