Information for 16-TGTAGAGA (Motif 33)

A G C T T C A G A C G T C G T A A C T G C G T A A C T G C G T A
Reverse Opposite:
C G A T A G T C A C G T A G T C A C G T C G T A A G T C C T G A
p-value:1e-2
log p-value:-5.609e+00
Information Content per bp:1.871
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif42.25%
Number of Background Sequences with motif5582.7
Percentage of Background Sequences with motif26.89%
Average Position of motif in Targets801.3 +/- 913.2bp
Average Position of motif in Background1708.2 +/- 2183.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.52
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Prdm14/MA1998.2/Jaspar

Match Rank:1
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:TGTAGAGA--
--TAGAGACC
 A G C T T C A G A C G T C G T A A C T G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T A C G C T G A T A C G G T C A T A G C T A G C

ZSCAN29/MA1602.2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTAGAGA
CNGTGTAGACG
 A C G T A C G T A C G T A G C T T C A G A C G T C G T A A C T G C G T A A C T G C G T A
G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

ZBTB32/MA1580.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTAGAGA--
TGTACAGTAT
 A G C T T C A G A C G T C G T A A C T G C G T A A C T G C G T A A C G T A C G T
G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T

ZNF768/MA1731.2/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGTAGAGA---
--CAGAGAGGG
 A G C T T C A G A C G T C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A T G C G T C A A T C G G T C A T A C G C T G A T A C G T C A G A T C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGTAGAGA---
GGTTAGAGACCT
 A C G T A G C T T C A G A C G T C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGTAGAGA---
-BTBRAGTGSN
 A G C T T C A G A C G T C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTAGAGA
CGTCTAGACA
 A C G T A C G T A G C T T C A G A C G T C G T A A C T G C G T A A C T G C G T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

ZNF574/MA1982.2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGTAGAGA-----
GGCTAGAGCGGCCC
 A C G T A G C T T C A G A C G T C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C A T G T A C G T G A C G A C T C G T A A T C G T C G A T C A G T G A C T C A G A C T G G T A C A T G C T A G C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGTAGAGA---
RHHCAGAGAGGB
 A C G T A G C T T C A G A C G T C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

ZNF35/MA2333.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGTAGAGA-
--TAGAATT
 A G C T T C A G A C G T C G T A A C T G C G T A A C T G C G T A A C G T
A C G T A C G T G C A T C G T A A C T G C T G A C G T A G C A T C G A T