Information for 20-AAAGGCAC (Motif 34)

C G T A C G T A C G T A A T C G T C A G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A T G C A C G T A C G T A C G T
p-value:1e-1
log p-value:-2.964e+00
Information Content per bp:1.922
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif12.68%
Number of Background Sequences with motif1415.6
Percentage of Background Sequences with motif6.82%
Average Position of motif in Targets307.2 +/- 572.0bp
Average Position of motif in Background1543.0 +/- 2050.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCAC
AAAAGTCAA
 A C G T C G T A C G T A C G T A A T C G T C A G A G T C C G T A A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGCAC
NBYCAAGGTCAC
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A T C G T C A G A G T C C G T A A G T C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

ZNF708/MA1730.2/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAAGGCAC---
--AGGCACAGC
 C G T A C G T A C G T A A T C G T C A G A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T T C G A T A C G T A C G G A T C T C G A A G T C T C G A A C T G G A T C

Lef1/MA0768.3/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAAGGCAC
ATCAAAGG---
 A C G T A C G T A C G T C G T A C G T A C G T A A T C G T C A G A G T C C G T A A G T C
G C T A C G A T A T G C C G T A T C G A T C G A C T A G T A C G A C G T A C G T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGGCAC
ASATCAAAGG---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A T C G T C A G A G T C C G T A A G T C
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T

FOXH1/MA0479.2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAAGGCAC-
-AATCCACA
 C G T A C G T A C G T A A T C G T C A G A G T C C G T A A G T C A C G T
A C G T C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

NR4A1/MA1112.3/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCAC
AAAGGTCA-
 A C G T C G T A C G T A C G T A A T C G T C A G A G T C C G T A A G T C
C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCAC-
CAAGGHCANV
 A C G T C G T A C G T A C G T A A T C G T C A G A G T C C G T A A G T C A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

ZBTB9(Zf)/HEK293T-ZBTB9-ChIP-Seq(GSE251687)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAAGGCAC----
--RGCCACGDRR
 C G T A C G T A C G T A A T C G T C A G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T A G A G T C A G T C C G T A A G T C C A T G C A T G T C G A C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGCAC
TCAAGGTCAN
 A C G T A C G T C G T A C G T A C G T A A T C G T C A G A G T C C G T A A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C