Information for 7-TTTTATGTTTTG (Motif 6)

A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A
p-value:1e-16
log p-value:-3.810e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif15.49%
Number of Background Sequences with motif49.5
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets246.9 +/- 362.1bp
Average Position of motif in Background1926.0 +/- 2465.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTTATGTTTTG-----
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTTTATGTTTTG----
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

Stat2/MA1623.2/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTTATGTTTTG
-TTTCTGTTTC-
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C T G
A C G T A G C T G A C T A G C T G A T C C G A T A T C G A G C T C G A T G A C T G A T C A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATGTTTTG-
NNGTANTGTTTTNC
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATGTTTTG
NGANTTTTATGGCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C T G
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

TCF7L1/MA1421.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTATGTTTTG
CCTTTGATCTTT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C T G
A G T C T A G C A G C T A C G T A C G T A C T G T G C A G C A T T A G C C G A T A G C T C G A T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATGTTTTG
NTTTTATGAC---
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C T G
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTTATGTTTTG
CTTTGATGTGSB-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C T G
A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T A C G T

ZIM3/MA1709.2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATGTTTTG
GGTTTCTGTTG--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C T G
C A T G T A C G G C A T A G C T C A G T G A T C G C A T A C T G G C A T A C G T C A T G A C G T A C G T

TBP/MA0108.3/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTTATGTTTTG
TTTTATA-----
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C T G
G C A T G A C T C G A T G C A T C T G A G C A T T C G A A C G T A C G T A C G T A C G T A C G T