Information for 1-WGTRGTGACAAW (Motif 1)

C G T A A C T G A C G T C T G A A C T G C G A T C A T G C T G A A T G C G T C A G C T A C G T A
Reverse Opposite:
G C A T C G A T A C G T A T C G G A C T G T A C C G T A A G T C A G C T G T C A T A G C G C A T
p-value:1e-24
log p-value:-5.536e+01
Information Content per bp:1.709
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif10.53%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets67.9 +/- 22.0bp
Average Position of motif in Background1355.4 +/- 729.6bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas4/MA1995.2/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:WGTRGTGACAAW
--TCGTGAC---
 C G T A A C T G A C G T C T G A A C T G C G A T C A T G C T G A A T G C G T C A G C T A C G T A
A C G T A C G T C A G T T A G C T C A G C A G T A T C G G T C A A T G C A C G T A C G T A C G T

MEIS1/MA0498.3/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:forward strand
Alignment:WGTRGTGACAAW
-----TGACA--
 C G T A A C T G A C G T C T G A A C T G C G A T C A T G C T G A A T G C G T C A G C T A C G T A
A C G T A C G T A C G T A C G T A C G T G C A T A T C G T G C A A G T C C T G A A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:WGTRGTGACAAW
---RHTGWCAR-
 C G T A A C T G A C G T C T G A A C T G C G A T C A T G C T G A A T G C G T C A G C T A C G T A
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:WGTRGTGACAAW
GGTGYTGACAGS
 C G T A A C T G A C G T C T G A A C T G C G A T C A T G C T G A A T G C G T C A G C T A C G T A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

MEIS3/MA0775.2/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:WGTRGTGACAAW
----TTGACAG-
 C G T A A C T G A C G T C T G A A C T G C G A T C A T G C T G A A T G C G T C A G C T A C G T A
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A C G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-WGTRGTGACAAW
NHGTCGTGAYDN-
 A C G T C G T A A C T G A C G T C T G A A C T G C G A T C A T G C T G A A T G C G T C A G C T A C G T A
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.62
Offset:5
Orientation:forward strand
Alignment:WGTRGTGACAAW-
-----TGTCANYT
 C G T A A C T G A C G T C T G A A C T G C G A T C A T G C T G A A T G C G T C A G C T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----WGTRGTGACAAW
GTNTTGTTGTGANNT-
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C T G A A C T G C G A T C A T G C T G A A T G C G T C A G C T A C G T A
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---WGTRGTGACAAW--
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T C G T A A C T G A C G T C T G A A C T G C G A T C A T G C T G A A T G C G T C A G C T A C G T A A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--WGTRGTGACAAW
GCTGTGGTTT----
 A C G T A C G T C G T A A C T G A C G T C T G A A C T G C G A T C A T G C T G A A T G C G T C A G C T A C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T