Information for 2-RATTCTTSGACT (Motif 2)

C T A G C G T A C G A T A G C T A G T C A C G T A C G T A T C G A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C A T G C C G T A C G T A A C T G C T G A C G T A A C G T A G T C
p-value:1e-22
log p-value:-5.187e+01
Information Content per bp:1.922
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif10.53%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets97.6 +/- 66.9bp
Average Position of motif in Background1182.2 +/- 1615.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat5a/MA1624.2/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:RATTCTTSGACT
--TTCTTGGAA-
 C T A G C G T A C G A T A G C T A G T C A C G T A C G T A T C G A C T G C G T A A G T C A C G T
A C G T A C G T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A A C G T

Stat5a::Stat5b/MA0519.2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:RATTCTTSGACT
--TTCTTGGAA-
 C T A G C G T A C G A T A G C T A G T C A C G T A C G T A T C G A C T G C G T A A G T C A C G T
A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A A C G T

Stat5b/MA1625.2/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:RATTCTTSGACT
--TTCTGGGAA-
 C T A G C G T A C G A T A G C T A G T C A C G T A C G T A T C G A C T G C G T A A G T C A C G T
A C G T A C G T A G C T G A C T T G A C G A C T C A T G C T A G C T A G C G T A C T G A A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:RATTCTTSGACT------
--NNATTGGACTTTNGNN
 C T A G C G T A C G A T A G C T A G T C A C G T A C G T A T C G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

SOX14/MA1562.2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RATTCTTSGACT
CATTGTTCG---
 C T A G C G T A C G A T A G C T A G T C A C G T A C G T A T C G A C T G C G T A A G T C A C G T
G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C G T A C G T A C G T

STAT3/MA0144.3/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RATTCTTSGACT
--TTCTGGGAA-
 C T A G C G T A C G A T A G C T A G T C A C G T A C G T A T C G A C T G C G T A A G T C A C G T
A C G T A C G T C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--RATTCTTSGACT--
NNNATTCCTCGAAAGN
 A C G T A C G T C T A G C G T A C G A T A G C T A G T C A C G T A C G T A T C G A C T G C G T A A G T C A C G T A C G T A C G T
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:RATTCTTSGACT
NTTTCTNAGAAA
 C T A G C G T A C G A T A G C T A G T C A C G T A C G T A T C G A C T G C G T A A G T C A C G T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----RATTCTTSGACT-
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T C T A G C G T A C G A T A G C T A G T C A C G T A C G T A T C G A C T G C G T A A G T C A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

SOX18/MA1563.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RATTCTTSGACT
GNATTGTT-----
 A C G T C T A G C G T A C G A T A G C T A G T C A C G T A C G T A T C G A C T G C G T A A G T C A C G T
A T C G G T C A C G T A A C G T A C G T T A C G A C G T A G C T A C G T A C G T A C G T A C G T A C G T