Information for 12-ACYCCTTTAC (Motif 28)

C G T A A T G C A G C T G T A C T A G C A C G T A C G T C G A T C G T A A G T C
Reverse Opposite:
A C T G A C G T G C T A C G T A C G T A A T C G A C T G C T G A T A C G A C G T
p-value:1e-7
log p-value:-1.621e+01
Information Content per bp:1.799
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif4.51%
Number of Background Sequences with motif24.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background1307.9 +/- 980.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL1/MA0877.4/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ACYCCTTTAC
---CGTTTA-
 C G T A A T G C A G C T G T A C T A G C A C G T A C G T C G A T C G T A A G T C
A C G T A C G T A C G T G T A C C T A G G C A T A G C T G C A T C G T A A C G T

BARHL2/MA0635.2/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:ACYCCTTTAC
---CGTTTA-
 C G T A A T G C A G C T G T A C T A G C A C G T A C G T C G A T C G T A A G T C
A C G T A C G T A C G T G A T C C T A G G C A T A C G T C G A T C G T A A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACYCCTTTAC--
TGAACCCGATGACCC
 A C G T A C G T A C G T C G T A A T G C A G C T G T A C T A G C A C G T A C G T C G A T C G T A A G T C A C G T A C G T
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACYCCTTTAC---
-CNTGTTTACATA
 C G T A A T G C A G C T G T A C T A G C A C G T A C G T C G A T C G T A A G T C A C G T A C G T A C G T
A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXN3/MA1489.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACYCCTTTAC
--TTGTTTAC
 C G T A A T G C A G C T G T A C T A G C A C G T A C G T C G A T C G T A A G T C
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACYCCTTTAC--
NYYTGTTTACHN
 C G T A A T G C A G C T G T A C T A G C A C G T A C G T C G A T C G T A A G T C A C G T A C G T
A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A

FOXI1/MA0042.2/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACYCCTTTAC
---TGTTTAC
 C G T A A T G C A G C T G T A C T A G C A C G T A C G T C G A T C G T A A G T C
A C G T A C G T A C G T A G C T C T A G G C A T A C G T A C G T C G T A A G T C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACYCCTTTAC----
--DGWTTTATGRCN
 C G T A A T G C A G C T G T A C T A G C A C G T A C G T C G A T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

FOXA3/MA1683.2/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACYCCTTTAC
---TGTTTAC
 C G T A A T G C A G C T G T A C T A G C A C G T A C G T C G A T C G T A A G T C
A C G T A C G T A C G T C G A T T C A G C G A T C A G T C A G T C T G A G A T C

FOXA2/MA0047.4/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACYCCTTTAC-
---TGTTTACA
 C G T A A T G C A G C T G T A C T A G C A C G T A C G T C G A T C G T A A G T C A C G T
A C G T A C G T A C G T C G A T T C A G C G A T C A G T C A G T C G T A G A T C G C T A