Information for 6-TCCAGTGAACTT (Motif 6)

A C G T A G T C A G T C C T G A A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T A C G T A G T C C G T A A G T C A G C T A C T G A C T G C G T A
p-value:1e-18
log p-value:-4.325e+01
Information Content per bp:1.974
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif6.77%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.7 +/- 10.8bp
Average Position of motif in Background855.6 +/- 651.7bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.2/Jaspar

Match Rank:1
Score:0.73
Offset:5
Orientation:forward strand
Alignment:TCCAGTGAACTT-
-----TGAACTTT
 A C G T A G T C A G T C C T G A A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T

Vdr/MA0693.4/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TCCAGTGAACTT
-----TGAACTC
 A C G T A G T C A G T C C T G A A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G C G T A G T C A G T A C G A C T A G T C

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TCCAGTGAACTT--
----TTGAMCTTTG
 A C G T A G T C A G T C C T G A A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

Stat6/MA0520.2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCCAGTGAACTT
TTCCTGAGAA---
 A C G T A C G T A G T C A G T C C T G A A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T
A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TCCAGTGAACTT
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCCAGTGAACTT
NANTTCATTGAATTA
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCCAGTGAACTT-----
-NNNGTGACCTTTGNNN
 A C G T A G T C A G T C C T G A A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

NR2F2/MA1111.2/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TCCAGTGAACTT
-----TGACCTT
 A C G T A G T C A G T C C T G A A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G T G C A G A T C G T A C G A C T G C A T

Ppara/MA2338.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TCCAGTGAACTT
-----TGACCTT
 A C G T A G T C A G T C C T G A A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C T A G C G T A G A T C T G A C A C G T G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCCAGTGAACTT--
----NTGACCTTGA
 A C G T A G T C A G T C C T G A A C T G A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A