Details for gene set BIOCARTA_ARF_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls #ClusterKO_versus_Cyp2c44KO
Phenotype	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls#ClusterKO_versus_Cyp2c44KO
Upregulated in class	ClusterKO
GeneSet	BIOCARTA_ARF_PATHWAY
Enrichment Score (ES)	0.78483486
Normalized Enrichment Score (NES)	1.4552917
Nominal p-value	0.004016064
FDR q-value	0.072589025
FWER p-Value	0.13

Fig 1: Enrichment plot: BIOCARTA_ARF_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cdkn2a	na	708	1.316	0.1712	Yes
2	Pik3cg	na	855	1.239	0.3417	Yes
3	Polr1c	na	3770	0.631	0.3782	Yes
4	Tbx2	na	4949	0.536	0.4322	Yes
5	Polr1d	na	5228	0.515	0.4992	Yes
6	Abl1	na	5321	0.508	0.5685	Yes
7	Pik3r1	na	7254	0.399	0.5900	Yes
8	E2f1	na	7978	0.365	0.6282	Yes
9	Myc	na	8354	0.347	0.6699	Yes
10	Trp53	na	8901	0.321	0.7051	Yes
11	Rb1	na	9470	0.297	0.7365	Yes
12	Polr1b	na	11373	0.217	0.7331	Yes
13	Pik3ca	na	11645	0.207	0.7572	Yes
14	Mdm2	na	11704	0.205	0.7848	Yes
15	Twist1	na	15974	0.048	0.7158	No
16	Polr1a	na	46320	-0.007	0.1784	No

Fig 2: BIOCARTA_ARF_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_ARF_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_ARF_PATHWAY