Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | RPKM_matrix___ClusterKO_vs_Cyp2c44KO.RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls #ClusterKO_versus_Cyp2c44KO |
| Phenotype | RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls#ClusterKO_versus_Cyp2c44KO |
| Upregulated in class | ClusterKO |
| GeneSet | BIOCARTA_G1_PATHWAY |
| Enrichment Score (ES) | 0.797541 |
| Normalized Enrichment Score (NES) | 1.405195 |
| Nominal p-value | 0.013513514 |
| FDR q-value | 0.05973057 |
| FWER p-Value | 0.265 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | Smad3 | na | 580 | 1.391 | 0.0692 | Yes |
| 2 | Cdkn2a | na | 708 | 1.316 | 0.1421 | Yes |
| 3 | Tgfb1 | na | 712 | 1.315 | 0.2171 | Yes |
| 4 | Tgfb2 | na | 878 | 1.230 | 0.2845 | Yes |
| 5 | Tgfb3 | na | 935 | 1.197 | 0.3518 | Yes |
| 6 | Cdkn2b | na | 1389 | 1.036 | 0.4030 | Yes |
| 7 | Cdk6 | na | 1400 | 1.031 | 0.4617 | Yes |
| 8 | Atr | na | 2918 | 0.723 | 0.4760 | Yes |
| 9 | Cdc25a | na | 2964 | 0.717 | 0.5162 | Yes |
| 10 | Tfdp1 | na | 3493 | 0.655 | 0.5443 | Yes |
| 11 | Cdk4 | na | 3690 | 0.639 | 0.5773 | Yes |
| 12 | Cdkn1b | na | 3719 | 0.636 | 0.6131 | Yes |
| 13 | Cdk1 | na | 4024 | 0.608 | 0.6425 | Yes |
| 14 | Skp2 | na | 4639 | 0.558 | 0.6634 | Yes |
| 15 | Ccne1 | na | 4859 | 0.543 | 0.6906 | Yes |
| 16 | Gsk3b | na | 5233 | 0.515 | 0.7134 | Yes |
| 17 | Abl1 | na | 5321 | 0.508 | 0.7408 | Yes |
| 18 | Dhfr | na | 5674 | 0.484 | 0.7622 | Yes |
| 19 | Smad4 | na | 6033 | 0.462 | 0.7822 | Yes |
| 20 | E2f1 | na | 7978 | 0.365 | 0.7686 | Yes |
| 21 | Ccnd1 | na | 8289 | 0.351 | 0.7831 | Yes |
| 22 | Trp53 | na | 8901 | 0.321 | 0.7907 | Yes |
| 23 | Rb1 | na | 9470 | 0.297 | 0.7975 | Yes |
| 24 | Cdk2 | na | 13504 | 0.136 | 0.7337 | No |
| 25 | Ccna1 | na | 18873 | 0.002 | 0.6386 | No |
| 26 | Cdkn1a | na | 54893 | -0.471 | 0.0263 | No |
