Details for gene set BIOCARTA_INFLAM_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls #ClusterKO_versus_Cyp2c44KO
Phenotype	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls#ClusterKO_versus_Cyp2c44KO
Upregulated in class	ClusterKO
GeneSet	BIOCARTA_INFLAM_PATHWAY
Enrichment Score (ES)	0.8204985
Normalized Enrichment Score (NES)	1.5008081
Nominal p-value	0.009861933
FDR q-value	0.04410421
FWER p-Value	0.034

Fig 1: Enrichment plot: BIOCARTA_INFLAM_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tnf	na	682	1.332	0.0896	Yes
2	Tgfb1	na	712	1.315	0.1894	Yes
3	Tgfb2	na	878	1.230	0.2804	Yes
4	Il1a	na	931	1.200	0.3711	Yes
5	Pdgfa	na	933	1.198	0.4625	Yes
6	Tgfb3	na	935	1.197	0.5539	Yes
7	Il7	na	1013	1.164	0.6414	Yes
8	Csf1	na	1123	1.125	0.7253	Yes
9	Csf2	na	2706	0.753	0.7548	Yes
10	Il11	na	4074	0.604	0.7766	Yes
11	Il10	na	5634	0.486	0.7860	Yes
12	Il15	na	5754	0.479	0.8205	Yes
13	Il2	na	10923	0.234	0.7466	No
14	Il6	na	11300	0.220	0.7568	No
15	Cd4	na	14020	0.116	0.7174	No
16	Ifng	na	14793	0.089	0.7104	No
17	Il13	na	16030	0.046	0.6920	No
18	Il5	na	17991	0.009	0.6579	No
19	Csf3	na	18121	0.008	0.6562	No
20	Ifna1	na	40631	0.000	0.2568	No
21	Il3	na	42349	0.000	0.2264	No
22	Ifnb1	na	48453	-0.059	0.1226	No
23	Il4	na	52191	-0.236	0.0743	No

Fig 2: BIOCARTA_INFLAM_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_INFLAM_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_INFLAM_PATHWAY