Details for gene set BIOCARTA_MITOCHONDRIA_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls #ClusterKO_versus_Cyp2c44KO
Phenotype	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls#ClusterKO_versus_Cyp2c44KO
Upregulated in class	ClusterKO
GeneSet	BIOCARTA_MITOCHONDRIA_PATHWAY
Enrichment Score (ES)	0.7528837
Normalized Enrichment Score (NES)	1.3994652
Nominal p-value	0.009861933
FDR q-value	0.06000165
FWER p-Value	0.281

Fig 1: Enrichment plot: BIOCARTA_MITOCHONDRIA_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Apaf1	na	542	1.420	0.1475	Yes
2	Bcl2	na	1285	1.071	0.2529	Yes
3	Bak1	na	1502	1.004	0.3601	Yes
4	Birc3	na	2142	0.852	0.4431	Yes
5	Bid	na	3709	0.637	0.4858	Yes
6	Xiap	na	3887	0.622	0.5515	Yes
7	Casp7	na	5835	0.475	0.5694	Yes
8	Birc2	na	6158	0.456	0.6142	Yes
9	Bax	na	6902	0.416	0.6470	Yes
10	Casp3	na	6964	0.413	0.6916	Yes
11	Cycs	na	7670	0.381	0.7212	Yes
12	Casp9	na	8122	0.359	0.7529	Yes
13	Casp8	na	11424	0.215	0.7181	No
14	Aifm1	na	14537	0.097	0.6736	No
15	Diablo	na	14790	0.089	0.6789	No
16	Casp6	na	17501	0.015	0.6325	No
17	Endog	na	49802	-0.115	0.0721	No
18	Dffa	na	50157	-0.132	0.0804	No
19	Dffb	na	52711	-0.271	0.0650	No

Fig 2: BIOCARTA_MITOCHONDRIA_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_MITOCHONDRIA_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_MITOCHONDRIA_PATHWAY