Details for gene set BIOCARTA_NKT_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls #ClusterKO_versus_Cyp2c44KO
Phenotype	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls#ClusterKO_versus_Cyp2c44KO
Upregulated in class	ClusterKO
GeneSet	BIOCARTA_NKT_PATHWAY
Enrichment Score (ES)	0.80603033
Normalized Enrichment Score (NES)	1.463427
Nominal p-value	0.006060606
FDR q-value	0.082338214
FWER p-Value	0.105

Fig 1: Enrichment plot: BIOCARTA_NKT_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ccr2	na	26	2.342	0.1095	Yes
2	Cxcr4	na	180	1.800	0.1913	Yes
3	Ccr3	na	208	1.753	0.2732	Yes
4	Ccr1	na	317	1.604	0.3466	Yes
5	Ccl4	na	654	1.351	0.4041	Yes
6	Tgfb1	na	712	1.315	0.4648	Yes
7	Tgfb2	na	878	1.230	0.5197	Yes
8	Tgfb3	na	935	1.197	0.5749	Yes
9	Ccr5	na	1066	1.145	0.6264	Yes
10	Ifngr1	na	1148	1.115	0.6773	Yes
11	Ccl3	na	1355	1.045	0.7227	Yes
12	Ccr7	na	1962	0.892	0.7539	Yes
13	Csf2	na	2706	0.753	0.7761	Yes
14	Ifngr2	na	3825	0.627	0.7857	Yes
15	Il4ra	na	4685	0.555	0.7965	Yes
16	Noct	na	5463	0.497	0.8060	Yes
17	Il12rb2	na	9256	0.305	0.7531	No
18	Il18r1	na	10435	0.255	0.7441	No
19	Cxcr3	na	10890	0.236	0.7471	No
20	Il2	na	10923	0.234	0.7575	No
21	Cd28	na	10965	0.232	0.7677	No
22	Cd4	na	14020	0.116	0.7190	No
23	Ifng	na	14793	0.089	0.7094	No
24	Cd40lg	na	15054	0.079	0.7085	No
25	Il5	na	17991	0.009	0.6568	No
26	Il4	na	52191	-0.236	0.0610	No
27	Il12rb1	na	52873	-0.282	0.0622	No

Fig 2: BIOCARTA_NKT_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_NKT_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_NKT_PATHWAY