Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | RPKM_matrix___ClusterKO_vs_Cyp2c44KO.RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls #ClusterKO_versus_Cyp2c44KO |
| Phenotype | RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls#ClusterKO_versus_Cyp2c44KO |
| Upregulated in class | ClusterKO |
| GeneSet | BIOCARTA_SHH_PATHWAY |
| Enrichment Score (ES) | 0.80117667 |
| Normalized Enrichment Score (NES) | 1.4197431 |
| Nominal p-value | 0.01775148 |
| FDR q-value | 0.068435945 |
| FWER p-Value | 0.228 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | Prkar2b | na | 217 | 1.728 | 0.2108 | Yes |
| 2 | Gli3 | na | 1080 | 1.141 | 0.3372 | Yes |
| 3 | Gli1 | na | 2187 | 0.843 | 0.4223 | Yes |
| 4 | Prkar1b | na | 2844 | 0.734 | 0.5018 | Yes |
| 5 | Prkar2a | na | 4411 | 0.577 | 0.5456 | Yes |
| 6 | Gsk3b | na | 5233 | 0.515 | 0.5950 | Yes |
| 7 | Smo | na | 6732 | 0.425 | 0.6212 | Yes |
| 8 | Prkacb | na | 6894 | 0.416 | 0.6701 | Yes |
| 9 | Sufu | na | 7165 | 0.403 | 0.7153 | Yes |
| 10 | Dyrk1a | na | 7352 | 0.395 | 0.7611 | Yes |
| 11 | Prkar1a | na | 7739 | 0.378 | 0.8012 | Yes |
| 12 | Shh | na | 12289 | 0.184 | 0.7433 | No |
| 13 | Dyrk1b | na | 47467 | -0.028 | 0.1227 | No |
| 14 | Ptch1 | na | 49360 | -0.096 | 0.1010 | No |
| 15 | Gli2 | na | 51283 | -0.189 | 0.0904 | No |
