Details for gene set BIOCARTA_TFF_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls #ClusterKO_versus_Cyp2c44KO
Phenotype	RPKM_matrix___ClusterKO_vs_Cyp2c44KO.cls#ClusterKO_versus_Cyp2c44KO
Upregulated in class	ClusterKO
GeneSet	BIOCARTA_TFF_PATHWAY
Enrichment Score (ES)	0.78721875
Normalized Enrichment Score (NES)	1.4200466
Nominal p-value	0.001980198
FDR q-value	0.07714167
FWER p-Value	0.228

Fig 1: Enrichment plot: BIOCARTA_TFF_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tff2	na	467	1.466	0.0958	Yes
2	Apaf1	na	542	1.420	0.1953	Yes
3	Pik3cg	na	855	1.239	0.2777	Yes
4	Tff3	na	1190	1.097	0.3497	Yes
5	Erbb2	na	1909	0.904	0.4011	Yes
6	Ctnnb1	na	2509	0.787	0.4464	Yes
7	Akt1	na	2566	0.775	0.5004	Yes
8	Mapk3	na	3582	0.648	0.5284	Yes
9	Itgb1	na	4038	0.607	0.5634	Yes
10	Grb2	na	4783	0.548	0.5892	Yes
11	Rhoa	na	4959	0.535	0.6241	Yes
12	Bad	na	4961	0.535	0.6621	Yes
13	Mapk1	na	5650	0.485	0.6843	Yes
14	Pik3r1	na	7254	0.399	0.6842	Yes
15	Shc1	na	7378	0.394	0.7100	Yes
16	Cycs	na	7670	0.381	0.7318	Yes
17	Casp9	na	8122	0.359	0.7493	Yes
18	Hras	na	8601	0.336	0.7646	Yes
19	Egfr	na	8660	0.333	0.7872	Yes
20	Pik3ca	na	11645	0.207	0.7490	No
21	Ghr	na	14726	0.091	0.7008	No
22	Sos1	na	15662	0.058	0.6883	No
23	Tff1	na	48858	-0.075	0.1046	No
24	Muc2	na	51018	-0.174	0.0786	No
25	Gh	na	52124	-0.232	0.0755	No

Fig 2: BIOCARTA_TFF_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_TFF_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_TFF_PATHWAY